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ModularImageAnalysis (MIA)

MIA

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Modules
  • Core
  • Images
  • Input output
  • Objects
    • Convert
    • Detect
    • Filter
    • Measure
      • Intensity
      • Miscellaneous
        • Adopt parent measurement
        • Adopt parent metadata
        • Apply Weka object classification
        • Bin objects by measurement
        • Calculate statistics for children
        • Calculate statistics for partners
        • Child object count
        • Object measurement calculator
        • Object timepoint
        • Parent object ID
        • Partner object count
        • Replace measurement value
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Miscellaneous

General object measurements, such as counting the number of child objects or binning measurements.

Adopt parent measurement

Adopt parent metadata

Apply Weka object classification

Apply a previously-prepared WEKA object classifier to a specified object collection from the workspace.

Bin objects by measurement

Distribute objects into a set of "bins" based on a measurement associated with each object.

Calculate statistics for children

Calculates statistics for a measurement associated with all child objects of parent object.

Calculate statistics for partners

Calculates statistics for a measurement associated with all partner objects of an input object.

Child object count

Calculates the number of children from a specific class.

Object measurement calculator

Perform a mathematical operation on measurements associated with each object of an object collection in the workspace.

Object timepoint

Store object timepoint as a measurement.

Parent object ID

Stores the ID number of an associated parent from a specific class.

Partner object count

Calculates the number of partners from a specific class.

Replace measurement value

Replaces measurement values matching specific criteria with different values.

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ModularImageAnalysis (MIA)

MIA

Wolfson Bioimaging Facility

Developed in the Wolfson Bioimaging Facility at the University of Bristol.

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