Detect
Modules resulting in creation of new objects to be stored in the workspace.
Detects circles within grayscale images using the Hough transform.
Cluster pointsClusters objects (based on centroid locations) using K-Means++ and/or DBSCAN algorithms.
Create whole slice objectsFor conversion of an image to individual slice objects.
Identify objectsCreates objects from an input binary image.
Manually identify objectsManually create objects using the ImageJ selection tools.
Rectangle detectionDetects rectangles within grayscale images using the Hough transform.
Ridge detectionDetects ridge objects in an image from the workspace.
Run TrackMateUses the TrackMate plugin included with Fiji to detect and track spots in images.
Sphere detectionDetects spheres within grayscale images using the Hough transform.
Spot detectionDetects spot-like features in 2D and 3D using TrackMate's LogDetector.
StarDist detectionImplements the StarDist plugin to detect objects.