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ModularImageAnalysis (MIA)

MIA

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Modules
  • Core
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  • Objects
    • Convert
    • Detect
    • Filter
      • Based on measurement
      • Based on metadata
      • Filter objects
      • Live measurement filter
      • Measurement extremes
      • Number of children
      • Number of partners
      • Object proximity
      • Objects with specific IDs
      • Remove on image edge
      • With / without measurement
      • With / without metadata
      • With / without parent
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Filter

Modules which can remove objects from an object collection (or move them to a new collection) based on various metrics.

Based on measurement

Filter an object collection based on a measurement value associated with this object.

Based on metadata

Filter an object collection based on a metadata value associated with this object.

Filter objects

DEPRECATED: Please use individual filter modules instead (e.

Live measurement filter

Measurement extremes

Filter an object collection to remove/retain the object with the largest/smallest value for a specific measurement.

Number of children

Filter an object collection based on the number of children each object has from another object collection.

Number of partners

Filter an object collection based on the number of partners each object has from another object collection.

Object proximity

Filters objects in close XY proximity based on a specific measurement.

Objects with specific IDs

Filter an object collection based on user-defined list of object ID numbers.

Remove on image edge

Filter an object collection based on contact of each object with the image edge.

With / without measurement

Filter an object collection based on the presence of a specific measurement for each object.

With / without metadata

Filter an object collection based on the presence of a specific metadata item for each object.

With / without parent

Filter an object collection based on the presence of a specific parent for each object.

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ModularImageAnalysis (MIA)

MIA

Wolfson Bioimaging Facility

Developed in the Wolfson Bioimaging Facility at the University of Bristol.

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