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ModularImageAnalysis (MIA)

MIA

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Modules
  • Core
  • Images
  • Input output
  • Objects
    • Convert
    • Detect
    • Filter
    • Measure
    • Process
    • Relate
      • Merge
      • Object slices to 3D
      • Relate many-to-many
      • Relate many-to-one
      • Relate objects
      • Relate one-to-one
      • Single class cluster
    • Track
    • Transform
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  • System
  • Visualisation
  • Workflow

Relate

Modules creating relationships between objects. Relationships can be one-to-many (parent-child) or one-to-one (partners).

Merge

Modules used for combining either different objects into one or combining objects from different collections into a single collection.

See modules
Object slices to 3D

Relate many-to-many

Relate objects of two classes based on spatial proximity or overlap.

Relate many-to-one

Relate objects of two classes based on a variety of metrics (e.

Relate objects

Relate objects of two classes based on a variety of metrics (e.

Relate one-to-one

Relate objects of two classes based on spatial proximity or overlap.

Single class cluster

Clusters objects (based on centroid locations) using K-Means++ and/or DBSCAN algorithms.

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ModularImageAnalysis (MIA)

MIA

Wolfson Bioimaging Facility

Developed in the Wolfson Bioimaging Facility at the University of Bristol.

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