Logo

ModularImageAnalysis (MIA)

MIA

  • Guides
  • Modules
  • Publications
  • Get involved
  • About
  • Guides
  • Modules
  • Publications
  • Get involved
  • About
Guides
  • Getting Started
  • Example Workflows
  • Processing View
  • Using existing workflows
  • Editing view
  • Creating workflows
  • Results format
  • Running headless
  • Troubleshooting

Guides

Guides covering use of MIA. These include instructions to download and install MIA, use existing or create new workflows or simply understand the general structure of MIA.

Getting Started

Downloading and installing MIA into Fiji

Example Workflows

Accessing example workflows demonstrating use of MIA, with descriptions for each step

Processing View

The default MIA interface for running existing workflows

Using existing workflows

Opening, configuring and running pre-prepared workflows distributed as .mia files

Editing view

The interface for creating, editing and testing workflows

Creating workflows

Creating a new workflow from scratch

Results format

Description of the default output results (.xlsx) format

Running headless

Running workflows directly from terminal

Troubleshooting

List of common issues and solutions

Logo

ModularImageAnalysis (MIA)

MIA

Wolfson Bioimaging Facility

Developed in the Wolfson Bioimaging Facility at the University of Bristol.

  • Explore
  • GitHub
  • Publications
  • ImageJ
  • Learn
  • About
  • Guides
  • YouTube
  • Examples
  • Follow
  • Twitter
  • Releases