Binary

Image operations which either act binary images. Binary images are 8-bit with 255-intensity background and 0-intensity objects.

Binary operations (legacy)

DEPRECATED: This Module has been superseeded by separate Modules for 2D and 3D binary operations.

Binary operations 2D

Applies stock ImageJ binary operations to an image in the workspace.

Calculate distance map

Creates a 32-bit greyscale image from an input binary image, where the value of each foreground pixel in the input image is equal to its Euclidean distance to the nearest background pixel.

Dilate and erode

Applies binary dilate or erode operations to an image in the workspace.

Extended minima/maxima

Detects extended minima or maxima in a specified input image.

Fill holes

Performs a 3D fill holes operation on an input binary image.

Fill holes by volume

Performs a volume-limited 3D fill holes operation on an input binary image.

Fix skeleton breaks

Fixes breaks (gaps) in binary skeleton images.

Skeletonise

Creates an skeletonised representation of a specific binary image in the workspace.

Watershed transform

Peforms a watershed transform on a specified input image.