Modules

Load image 2

In development image loader using ImgLib2.

Description

In development image loader using ImgLib2.

Parameters

Parameter Description
Output image Name assigned to the image.
Import mode Controls where the image will be loaded from:
  • "Current file" (default option) will import the current root-file for the workspace (this is the file specified in the "Input control" module).
  • "Matching format" will load the image matching a filename based on the root-file for the workspace and a series of rules.
  • "Specific file" will load the image at the location specified by "File path".
Generic format Format for a generic filename. Plain text can be mixed with global variables or metadata values currently stored in the workspace. Global variables are specified using the "V{name}" notation, where "name" is the name of the variable to insert. Similarly, metadata values are specified with the "M{name}" notation.
File path Path to file to be loaded.
Series mode Controls which series should be loaded for multiseries files (e.g. Leica LIF files):
  • "Current series" will load the same series as the current root file (i.e. that selected via "Input control").
  • "Specific series" will load a specific series specified by the "Series number"parameter.
Series number If a specific series is being loaded ("Series mode" set to "Specific series"), this is the series that will be used.